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Cluster: HRGMv2_0474_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0474_3 HRGMv2_0474_3_125 141246 142091 + 1.A.34.1.3
pfam HRGMv2_0474_3 HRGMv2_0474_3_126 142445 142990 + DUF4199
CAZyme HRGMv2_0474_3 HRGMv2_0474_3_127 143034 144038 + GT2
pfam HRGMv2_0474_3 HRGMv2_0474_3_128 144098 144703 + DUF4254
CAZyme HRGMv2_0474_3 HRGMv2_0474_3_129 144760 145839 + GT9
pfam HRGMv2_0474_3 HRGMv2_0474_3_130 146139 146615 + DUF4143
NULL(UNKNOWN) HRGMv2_0474_3 HRGMv2_0474_3_131 146572 146874 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0474_3 HRGMv2_0474_3_132 146859 148301 - GH13
Gene ID: HRGMv2_0474_3_125
Type: TC
Location: 141246 - 142091 (+)
Gene ID: HRGMv2_0474_3_126
Type: pfam
Location: 142445 - 142990 (+)
Gene ID: HRGMv2_0474_3_127
Type: CAZyme
Location: 143034 - 144038 (+)
Gene ID: HRGMv2_0474_3_128
Type: pfam
Location: 144098 - 144703 (+)
Gene ID: HRGMv2_0474_3_129
Type: CAZyme
Location: 144760 - 145839 (+)
Gene ID: HRGMv2_0474_3_130
Type: pfam
Location: 146139 - 146615 (+)
Gene ID: HRGMv2_0474_3_131
Type:
Location: 146572 - 146874 (+)
Gene ID: HRGMv2_0474_3_132
Type: CAZyme
Location: 146859 - 148301 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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