Cluster: HRGMv2_0474_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0474
- CGC Family ID: CGCFAM_06009
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0474_2 | HRGMv2_0474_2_169 | 188717 | 190063 | + | 2.A.1.10.2 |
| pfam | HRGMv2_0474_2 | HRGMv2_0474_2_170 | 190070 | 190789 | + | Methyltrans_RNA | PUA_4 |
| CAZyme | HRGMv2_0474_2 | HRGMv2_0474_2_171 | 190885 | 191967 | - | GT4 |
| CAZyme | HRGMv2_0474_2 | HRGMv2_0474_2_172 | 191964 | 193079 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0474_2 | HRGMv2_0474_2_173 | 193076 | 194188 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0474_2 | HRGMv2_0474_2_174 | 194172 | 195428 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0474_2 | HRGMv2_0474_2_175 | 195412 | 196761 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0474_2 | HRGMv2_0474_2_176 | 196768 | 197880 | - | Glyco_tran_WbsX |
| CAZyme | HRGMv2_0474_2 | HRGMv2_0474_2_177 | 197898 | 198860 | - | GT2 |
| pfam | HRGMv2_0474_2 | HRGMv2_0474_2_178 | 198869 | 199852 | - | Acyl_transf_3 |
| CAZyme | HRGMv2_0474_2 | HRGMv2_0474_2_179 | 199894 | 200916 | - | GT2 |
Gene ID: HRGMv2_0474_2_169
Type: TC
Location: 188717 - 190063 (+)
Type: TC
Location: 188717 - 190063 (+)
Gene ID: HRGMv2_0474_2_170
Type: pfam
Location: 190070 - 190789 (+)
Type: pfam
Location: 190070 - 190789 (+)
Gene ID: HRGMv2_0474_2_171
Type: CAZyme
Location: 190885 - 191967 (-)
Type: CAZyme
Location: 190885 - 191967 (-)
Gene ID: HRGMv2_0474_2_172
Type: CAZyme
Location: 191964 - 193079 (-)
Type: CAZyme
Location: 191964 - 193079 (-)
Gene ID: HRGMv2_0474_2_173
Type:
Location: 193076 - 194188 (-)
Type:
Location: 193076 - 194188 (-)
Gene ID: HRGMv2_0474_2_174
Type: CAZyme
Location: 194172 - 195428 (-)
Type: CAZyme
Location: 194172 - 195428 (-)
Gene ID: HRGMv2_0474_2_175
Type:
Location: 195412 - 196761 (-)
Type:
Location: 195412 - 196761 (-)
Gene ID: HRGMv2_0474_2_176
Type: pfam
Location: 196768 - 197880 (-)
Type: pfam
Location: 196768 - 197880 (-)
Gene ID: HRGMv2_0474_2_177
Type: CAZyme
Location: 197898 - 198860 (-)
Type: CAZyme
Location: 197898 - 198860 (-)
Gene ID: HRGMv2_0474_2_178
Type: pfam
Location: 198869 - 199852 (-)
Type: pfam
Location: 198869 - 199852 (-)
Gene ID: HRGMv2_0474_2_179
Type: CAZyme
Location: 199894 - 200916 (-)
Type: CAZyme
Location: 199894 - 200916 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Amulumruptor
Species
Amulumruptor caecigallinarius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.