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Cluster: HRGMv2_0474_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0474_12 HRGMv2_0474_12_6 5674 8925 + GH13_42
NULL(UNKNOWN) HRGMv2_0474_12 HRGMv2_0474_12_7 9252 9416 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0474_12 HRGMv2_0474_12_8 9457 12843 + GH13_42
NULL(UNKNOWN) HRGMv2_0474_12 HRGMv2_0474_12_9 12933 13475 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0474_12 HRGMv2_0474_12_10 13595 14140 - HATPase_c_2
TC HRGMv2_0474_12 HRGMv2_0474_12_11 14362 15021 + 3.A.1.122.2
TC HRGMv2_0474_12 HRGMv2_0474_12_12 15049 16269 + 3.A.1.122.1
TC HRGMv2_0474_12 HRGMv2_0474_12_13 16285 17541 + 3.A.1.122.12
TC HRGMv2_0474_12 HRGMv2_0474_12_14 17570 18685 + 2.A.6.2.27
Gene ID: HRGMv2_0474_12_6
Type: CAZyme
Location: 5674 - 8925 (+)
Gene ID: HRGMv2_0474_12_7
Type:
Location: 9252 - 9416 (-)
Gene ID: HRGMv2_0474_12_8
Type: CAZyme
Location: 9457 - 12843 (+)
Gene ID: HRGMv2_0474_12_9
Type:
Location: 12933 - 13475 (+)
Gene ID: HRGMv2_0474_12_10
Type: pfam
Location: 13595 - 14140 (-)
Gene ID: HRGMv2_0474_12_11
Type: TC
Location: 14362 - 15021 (+)
Gene ID: HRGMv2_0474_12_12
Type: TC
Location: 15049 - 16269 (+)
Gene ID: HRGMv2_0474_12_13
Type: TC
Location: 16285 - 17541 (+)
Gene ID: HRGMv2_0474_12_14
Type: TC
Location: 17570 - 18685 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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