Genome Details
Selected Rep_genome_ID: HRGMv2_0420
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900760815
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0420 | 2,926,884 | 97.98% | 0.754% | UK | Europe | HRGM |
| MGYG000001641 | 2,823,092 | 96.29% | 0.5% | United States | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0420_CGC23 | CGCFAM_00017 | Yes | 6 | 2 | fructan |
| HRGMv2_0420_CGC12 | CGCFAM_00028 | Yes | 5 | 3 | |
| HRGMv2_0420_CGC4 | CGCFAM_00069 | Yes | 4 | 1 | |
| HRGMv2_0420_CGC8 | CGCFAM_00129 | Yes | 8 | 5 | beta-mannan |
| HRGMv2_0420_CGC1 | CGCFAM_00356 | Yes | 7 | 1 | |
| HRGMv2_0420_CGC7 | CGCFAM_00574 | Yes | 18 | 6 | |
| HRGMv2_0420_CGC11 | CGCFAM_00623 | Yes | 6 | 1 | |
| HRGMv2_0420_CGC13 | CGCFAM_00714 | Yes | 7 | 2 | |
| HRGMv2_0420_CGC3 | CGCFAM_03997 | Yes | 4 | 1 |
Top CAZyme Families