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Cluster: HRGMv2_0420_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0420_5 HRGMv2_0420_5_19 14254 15711 - 2.A.2.3.6
CAZyme HRGMv2_0420_5 HRGMv2_0420_5_20 15750 16952 - GH130_1
CAZyme HRGMv2_0420_5 HRGMv2_0420_5_21 16949 18034 - GH26
CAZyme HRGMv2_0420_5 HRGMv2_0420_5_22 18054 20240 - GH36
CAZyme HRGMv2_0420_5 HRGMv2_0420_5_23 20237 21880 - GH26
NULL(UNKNOWN) HRGMv2_0420_5 HRGMv2_0420_5_24 21999 23261 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0420_5 HRGMv2_0420_5_25 23431 24690 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0420_5 HRGMv2_0420_5_26 24878 25387 - GH26
Gene ID: HRGMv2_0420_5_19
Type: TC
Location: 14254 - 15711 (-)
Gene ID: HRGMv2_0420_5_20
Type: CAZyme
Location: 15750 - 16952 (-)
Gene ID: HRGMv2_0420_5_21
Type: CAZyme
Location: 16949 - 18034 (-)
Gene ID: HRGMv2_0420_5_22
Type: CAZyme
Location: 18054 - 20240 (-)
Gene ID: HRGMv2_0420_5_23
Type: CAZyme
Location: 20237 - 21880 (-)
Gene ID: HRGMv2_0420_5_24
Type:
Location: 21999 - 23261 (-)
Gene ID: HRGMv2_0420_5_25
Type:
Location: 23431 - 24690 (-)
Gene ID: HRGMv2_0420_5_26
Type: CAZyme
Location: 24878 - 25387 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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