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Cluster: HRGMv2_0420_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0420_12 HRGMv2_0420_12_17 14776 16146 + 2.A.1.10.2
pfam HRGMv2_0420_12 HRGMv2_0420_12_18 16143 16853 + Methyltrans_RNA | PUA_4
pfam HRGMv2_0420_12 HRGMv2_0420_12_19 16883 17707 + DAHP_synth_1
TC HRGMv2_0420_12 HRGMv2_0420_12_20 17701 19209 - 1.A.23.4.5
pfam HRGMv2_0420_12 HRGMv2_0420_12_21 19511 19972 + NDK
CAZyme HRGMv2_0420_12 HRGMv2_0420_12_22 19997 20923 + CBM50
CAZyme HRGMv2_0420_12 HRGMv2_0420_12_23 21002 22252 - GH53
Gene ID: HRGMv2_0420_12_17
Type: TC
Location: 14776 - 16146 (+)
Gene ID: HRGMv2_0420_12_18
Type: pfam
Location: 16143 - 16853 (+)
Gene ID: HRGMv2_0420_12_19
Type: pfam
Location: 16883 - 17707 (+)
Gene ID: HRGMv2_0420_12_20
Type: TC
Location: 17701 - 19209 (-)
Gene ID: HRGMv2_0420_12_21
Type: pfam
Location: 19511 - 19972 (+)
Gene ID: HRGMv2_0420_12_22
Type: CAZyme
Location: 19997 - 20923 (+)
Gene ID: HRGMv2_0420_12_23
Type: CAZyme
Location: 21002 - 22252 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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