Cluster: HRGMv2_0420_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: HRGMv2_0420
- CGC Family ID: CGCFAM_00017
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0420_42 | HRGMv2_0420_42_13 | 10483 | 11469 | + | GT2 |
| pfam | HRGMv2_0420_42 | HRGMv2_0420_42_14 | 11580 | 13346 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0420_42 | HRGMv2_0420_42_15 | 13368 | 16418 | - | 1.B.14.6.1 |
| TF | HRGMv2_0420_42 | HRGMv2_0420_42_16 | 16562 | 19255 | - | HTH_AraC |
| CAZyme | HRGMv2_0420_42 | HRGMv2_0420_42_17 | 19468 | 21294 | + | GH32 |
| TC | HRGMv2_0420_42 | HRGMv2_0420_42_18 | 21303 | 22496 | + | 2.A.1.7.17 |
Gene ID: HRGMv2_0420_42_13
Type: CAZyme
Location: 10483 - 11469 (+)
Type: CAZyme
Location: 10483 - 11469 (+)
Gene ID: HRGMv2_0420_42_14
Type: pfam
Location: 11580 - 13346 (-)
Type: pfam
Location: 11580 - 13346 (-)
Gene ID: HRGMv2_0420_42_15
Type: TC
Location: 13368 - 16418 (-)
Type: TC
Location: 13368 - 16418 (-)
Gene ID: HRGMv2_0420_42_16
Type: TF
Location: 16562 - 19255 (-)
Type: TF
Location: 16562 - 19255 (-)
Gene ID: HRGMv2_0420_42_17
Type: CAZyme
Location: 19468 - 21294 (+)
Type: CAZyme
Location: 19468 - 21294 (+)
Gene ID: HRGMv2_0420_42_18
Type: TC
Location: 21303 - 22496 (+)
Type: TC
Location: 21303 - 22496 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900760815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.