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Genome Details

Selected Rep_genome_ID: HRGMv2_0341
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides sp900548175
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0341 3,262,089 98.31% 0.461% UK Europe HRGM
Rep_548 3,414,068 97.6923% 0.766968% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0341_CGC19 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0341_CGC33 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0341_CGC34 CGCFAM_00001 Yes 5 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0341_CGC16 CGCFAM_00003 Yes 7 3
HRGMv2_0341_CGC13 CGCFAM_00028 Yes 5 3
HRGMv2_0341_CGC56 CGCFAM_00089 Yes 4 1
HRGMv2_0341_CGC26 CGCFAM_00109 Yes 4 2 host glycan
HRGMv2_0341_CGC50 CGCFAM_00150 Yes 4 1
HRGMv2_0341_CGC58 CGCFAM_00444 Yes 3 1
HRGMv2_0341_CGC47 CGCFAM_00482 Yes 5 1 fructan
HRGMv2_0341_CGC23 CGCFAM_00612 Yes 4 1
HRGMv2_0341_CGC51 CGCFAM_00724 Yes 5 1 xylan
HRGMv2_0341_CGC36 CGCFAM_00760 Yes 3 1
HRGMv2_0341_CGC20 CGCFAM_00777 Yes 4 1
HRGMv2_0341_CGC41 CGCFAM_00968 Yes 6 3
HRGMv2_0341_CGC14 CGCFAM_01115 Yes 4 1
HRGMv2_0341_CGC18 CGCFAM_01165 Yes 12 5
HRGMv2_0341_CGC43 CGCFAM_01225 Yes 9 1
HRGMv2_0341_CGC1 CGCFAM_01380 Yes 3 2
HRGMv2_0341_CGC10 CGCFAM_01678 Yes 8 1
HRGMv2_0341_CGC25 CGCFAM_01940 Yes 5 1
HRGMv2_0341_CGC61 CGCFAM_02540 Yes 3 1
HRGMv2_0341_CGC40 CGCFAM_03996 Yes 6 1
HRGMv2_0341_CGC31 CGCFAM_04302 Yes 3 1
HRGMv2_0341_CGC22 CGCFAM_04834 Yes 6 2
Top CAZyme Families