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Cluster: HRGMv2_0341_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0341_21 HRGMv2_0341_21_3 4726 7116 + GH127
pfam HRGMv2_0341_21 HRGMv2_0341_21_4 7348 10026 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
TC HRGMv2_0341_21 HRGMv2_0341_21_5 10152 11657 - 8.A.46.3.3
TC HRGMv2_0341_21 HRGMv2_0341_21_6 11712 14825 - 1.B.14.6.1
pfam HRGMv2_0341_21 HRGMv2_0341_21_7 15211 16788 - PDDEXK_9 | AAA-ATPase_like
pfam HRGMv2_0341_21 HRGMv2_0341_21_8 17121 18599 - SusD_RagB | SusD-like_3
TC HRGMv2_0341_21 HRGMv2_0341_21_9 18630 21638 - 1.B.14.6.1
TC HRGMv2_0341_21 HRGMv2_0341_21_10 22387 25560 + 1.B.14.6.1
TC HRGMv2_0341_21 HRGMv2_0341_21_11 25608 27164 + 8.A.46.3.3
Gene ID: HRGMv2_0341_21_3
Type: CAZyme
Location: 4726 - 7116 (+)
Gene ID: HRGMv2_0341_21_4
Type: pfam
Location: 7348 - 10026 (+)
Gene ID: HRGMv2_0341_21_5
Type: TC
Location: 10152 - 11657 (-)
Gene ID: HRGMv2_0341_21_6
Type: TC
Location: 11712 - 14825 (-)
Gene ID: HRGMv2_0341_21_7
Type: pfam
Location: 15211 - 16788 (-)
Gene ID: HRGMv2_0341_21_8
Type: pfam
Location: 17121 - 18599 (-)
Gene ID: HRGMv2_0341_21_9
Type: TC
Location: 18630 - 21638 (-)
Gene ID: HRGMv2_0341_21_10
Type: TC
Location: 22387 - 25560 (+)
Gene ID: HRGMv2_0341_21_11
Type: TC
Location: 25608 - 27164 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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