Genome Details
Selected Rep_genome_ID: HRGMv2_0341
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900548175
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0341 | 3,262,089 | 98.31% | 0.461% | UK | Europe | HRGM |
| Rep_548 | 3,414,068 | 97.6923% | 0.766968% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0341_CGC6 | CGCFAM_05488 | Yes | 3 | 1 | |
| HRGMv2_0341_CGC38 | CGCFAM_05988 | Yes | 5 | 2 | |
| HRGMv2_0341_CGC8 | CGCFAM_08415 | Yes | 9 | 3 | |
| HRGMv2_0341_CGC24 | CGCFAM_09178 | Yes | 4 | 1 | |
| HRGMv2_0341_CGC12 | CGCFAM_09619 | Yes | 5 | 1 | |
| HRGMv2_0341_CGC15 | CGCFAM_09620 | Yes | 8 | 1 | |
| HRGMv2_0341_CGC2 | CGCFAM_09621 | Yes | 4 | 1 | |
| HRGMv2_0341_CGC28 | CGCFAM_09622 | Yes | 10 | 1 | |
| HRGMv2_0341_CGC29 | CGCFAM_09623 | Yes | 11 | 1 | |
| HRGMv2_0341_CGC3 | CGCFAM_09624 | Yes | 6 | 4 | |
| HRGMv2_0341_CGC39 | CGCFAM_09625 | Yes | 4 | 2 | |
| HRGMv2_0341_CGC4 | CGCFAM_09626 | Yes | 4 | 1 |
Top CAZyme Families