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Cluster: HRGMv2_0341_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0341_10 HRGMv2_0341_10_37 46654 48171 - 2.A.17.1.6
pfam HRGMv2_0341_10 HRGMv2_0341_10_38 48202 49272 - DUF4831
pfam HRGMv2_0341_10 HRGMv2_0341_10_39 49500 50975 - SusD-like | SusD-like | SusD-like_2
TC HRGMv2_0341_10 HRGMv2_0341_10_40 51001 54264 - 1.B.14.6.2
TC HRGMv2_0341_10 HRGMv2_0341_10_41 55239 56855 - 8.A.46.1.3
TC HRGMv2_0341_10 HRGMv2_0341_10_42 56895 59948 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0341_10 HRGMv2_0341_10_43 60044 60163 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0341_10 HRGMv2_0341_10_44 60374 62485 + GH13_8
pfam HRGMv2_0341_10 HRGMv2_0341_10_45 62495 63469 + PMI_typeI_cat | MPI_cupin_dom
pfam HRGMv2_0341_10 HRGMv2_0341_10_46 63554 64117 + DNA_binding_1
TC HRGMv2_0341_10 HRGMv2_0341_10_47 64206 65876 + 2.A.81.1.2
Gene ID: HRGMv2_0341_10_37
Type: TC
Location: 46654 - 48171 (-)
Gene ID: HRGMv2_0341_10_38
Type: pfam
Location: 48202 - 49272 (-)
Gene ID: HRGMv2_0341_10_39
Type: pfam
Location: 49500 - 50975 (-)
Gene ID: HRGMv2_0341_10_40
Type: TC
Location: 51001 - 54264 (-)
Gene ID: HRGMv2_0341_10_41
Type: TC
Location: 55239 - 56855 (-)
Gene ID: HRGMv2_0341_10_42
Type: TC
Location: 56895 - 59948 (-)
Gene ID: HRGMv2_0341_10_43
Type:
Location: 60044 - 60163 (-)
Gene ID: HRGMv2_0341_10_44
Type: CAZyme
Location: 60374 - 62485 (+)
Gene ID: HRGMv2_0341_10_45
Type: pfam
Location: 62495 - 63469 (+)
Gene ID: HRGMv2_0341_10_46
Type: pfam
Location: 63554 - 64117 (+)
Gene ID: HRGMv2_0341_10_47
Type: TC
Location: 64206 - 65876 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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