Cluster: HRGMv2_0341_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0341
- CGC Family ID: CGCFAM_09619
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0341_4 | HRGMv2_0341_4_3 | 1999 | 3684 | + | CBM93 | CBM93 | GH33 |
| pfam | HRGMv2_0341_4 | HRGMv2_0341_4_4 | 3818 | 4828 | - | DUF4249 |
| TC | HRGMv2_0341_4 | HRGMv2_0341_4_5 | 4832 | 7495 | - | 1.B.14.6.12 |
| STP | HRGMv2_0341_4 | HRGMv2_0341_4_6 | 7499 | 8374 | - | FecR |
| TC | HRGMv2_0341_4 | HRGMv2_0341_4_7 | 8493 | 9785 | - | 9.A.40.2.4 |
Gene ID: HRGMv2_0341_4_3
Type: CAZyme
Location: 1999 - 3684 (+)
Type: CAZyme
Location: 1999 - 3684 (+)
Gene ID: HRGMv2_0341_4_4
Type: pfam
Location: 3818 - 4828 (-)
Type: pfam
Location: 3818 - 4828 (-)
Gene ID: HRGMv2_0341_4_5
Type: TC
Location: 4832 - 7495 (-)
Type: TC
Location: 4832 - 7495 (-)
Gene ID: HRGMv2_0341_4_6
Type: STP
Location: 7499 - 8374 (-)
Type: STP
Location: 7499 - 8374 (-)
Gene ID: HRGMv2_0341_4_7
Type: TC
Location: 8493 - 9785 (-)
Type: TC
Location: 8493 - 9785 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900548175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.