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Cluster: HRGMv2_0341_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0341_3 HRGMv2_0341_3_42 46309 47469 - CE9
CAZyme HRGMv2_0341_3 HRGMv2_0341_3_43 47515 48681 - CE9
TC HRGMv2_0341_3 HRGMv2_0341_3_44 48949 50883 - 3.A.1.121.4
pfam HRGMv2_0341_3 HRGMv2_0341_3_45 50975 51532 + DUF3332
CAZyme HRGMv2_0341_3 HRGMv2_0341_3_46 51605 54955 + GH2
sulfatase HRGMv2_0341_3 HRGMv2_0341_3_47 55170 55820 + S1_20
pfam HRGMv2_0341_3 HRGMv2_0341_3_48 55899 56738 - Fumble
TC HRGMv2_0341_3 HRGMv2_0341_3_49 56963 58684 + 3.A.2.1.2
TC HRGMv2_0341_3 HRGMv2_0341_3_50 58690 58926 + 3.A.2.1.7
Gene ID: HRGMv2_0341_3_42
Type: CAZyme
Location: 46309 - 47469 (-)
Gene ID: HRGMv2_0341_3_43
Type: CAZyme
Location: 47515 - 48681 (-)
Gene ID: HRGMv2_0341_3_44
Type: TC
Location: 48949 - 50883 (-)
Gene ID: HRGMv2_0341_3_45
Type: pfam
Location: 50975 - 51532 (+)
Gene ID: HRGMv2_0341_3_46
Type: CAZyme
Location: 51605 - 54955 (+)
Gene ID: HRGMv2_0341_3_47
Type: sulfatase
Location: 55170 - 55820 (+)
Gene ID: HRGMv2_0341_3_48
Type: pfam
Location: 55899 - 56738 (-)
Gene ID: HRGMv2_0341_3_49
Type: TC
Location: 56963 - 58684 (+)
Gene ID: HRGMv2_0341_3_50
Type: TC
Location: 58690 - 58926 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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