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Cluster: HRGMv2_0341_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0341_10 HRGMv2_0341_10_9 11546 14926 + 3.A.5.1.1
pfam HRGMv2_0341_10 HRGMv2_0341_10_10 15029 16204 + Gly_kinase
NULL(UNKNOWN) HRGMv2_0341_10 HRGMv2_0341_10_11 16314 17045 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0341_10 HRGMv2_0341_10_12 17292 19175 + 3.A.1.120.6
TC HRGMv2_0341_10 HRGMv2_0341_10_13 19190 20365 + 2.A.1.46.5
NULL(UNKNOWN) HRGMv2_0341_10 HRGMv2_0341_10_14 20636 21013 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0341_10 HRGMv2_0341_10_15 21105 22352 - DUF4934 | DUF5128 | DUF5128
CAZyme HRGMv2_0341_10 HRGMv2_0341_10_16 22460 24043 - GH109
STP HRGMv2_0341_10 HRGMv2_0341_10_17 24539 25738 + Aminotran_1_2
TC HRGMv2_0341_10 HRGMv2_0341_10_18 25753 26997 + 3.A.1.125.1
Gene ID: HRGMv2_0341_10_9
Type: TC
Location: 11546 - 14926 (+)
Gene ID: HRGMv2_0341_10_10
Type: pfam
Location: 15029 - 16204 (+)
Gene ID: HRGMv2_0341_10_11
Type:
Location: 16314 - 17045 (+)
Gene ID: HRGMv2_0341_10_12
Type: TC
Location: 17292 - 19175 (+)
Gene ID: HRGMv2_0341_10_13
Type: TC
Location: 19190 - 20365 (+)
Gene ID: HRGMv2_0341_10_14
Type:
Location: 20636 - 21013 (+)
Gene ID: HRGMv2_0341_10_15
Type: pfam
Location: 21105 - 22352 (-)
Gene ID: HRGMv2_0341_10_16
Type: CAZyme
Location: 22460 - 24043 (-)
Gene ID: HRGMv2_0341_10_17
Type: STP
Location: 24539 - 25738 (+)
Gene ID: HRGMv2_0341_10_18
Type: TC
Location: 25753 - 26997 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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