dbCAN Logo

Cluster: HRGMv2_0341_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0341_3 HRGMv2_0341_3_94 107719 108537 + GT5
pfam HRGMv2_0341_3 HRGMv2_0341_3_95 108547 109929 + DUF4270
pfam HRGMv2_0341_3 HRGMv2_0341_3_96 109995 110969 - Formyl_trans_N | Formyl_trans_C
TC HRGMv2_0341_3 HRGMv2_0341_3_97 110975 112765 - 2.A.49.6.1
TC HRGMv2_0341_3 HRGMv2_0341_3_98 112770 114173 - 9.B.18.1.3
pfam HRGMv2_0341_3 HRGMv2_0341_3_99 114179 114748 - Sua5_yciO_yrdC
pfam HRGMv2_0341_3 HRGMv2_0341_3_100 115052 116779 + DHH | DHHA1 | RecJ_OB
TC HRGMv2_0341_3 HRGMv2_0341_3_101 116800 118728 + 2.A.16.2.2
Gene ID: HRGMv2_0341_3_94
Type: CAZyme
Location: 107719 - 108537 (+)
Gene ID: HRGMv2_0341_3_95
Type: pfam
Location: 108547 - 109929 (+)
Gene ID: HRGMv2_0341_3_96
Type: pfam
Location: 109995 - 110969 (-)
Gene ID: HRGMv2_0341_3_97
Type: TC
Location: 110975 - 112765 (-)
Gene ID: HRGMv2_0341_3_98
Type: TC
Location: 112770 - 114173 (-)
Gene ID: HRGMv2_0341_3_99
Type: pfam
Location: 114179 - 114748 (-)
Gene ID: HRGMv2_0341_3_100
Type: pfam
Location: 115052 - 116779 (+)
Gene ID: HRGMv2_0341_3_101
Type: TC
Location: 116800 - 118728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List