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Cluster: HRGMv2_0341_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0341_5 HRGMv2_0341_5_101 121287 121937 - 2.A.95.1.3
pfam HRGMv2_0341_5 HRGMv2_0341_5_102 121947 122954 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC HRGMv2_0341_5 HRGMv2_0341_5_103 122951 123583 - 2.A.123.4.1
CAZyme HRGMv2_0341_5 HRGMv2_0341_5_104 123580 124323 - GT2
CAZyme HRGMv2_0341_5 HRGMv2_0341_5_105 124332 125978 - GT83
sulfatase HRGMv2_0341_5 HRGMv2_0341_5_106 126076 126882 - S1_20
CAZyme HRGMv2_0341_5 HRGMv2_0341_5_107 126940 127674 - GT2
Gene ID: HRGMv2_0341_5_101
Type: TC
Location: 121287 - 121937 (-)
Gene ID: HRGMv2_0341_5_102
Type: pfam
Location: 121947 - 122954 (-)
Gene ID: HRGMv2_0341_5_103
Type: TC
Location: 122951 - 123583 (-)
Gene ID: HRGMv2_0341_5_104
Type: CAZyme
Location: 123580 - 124323 (-)
Gene ID: HRGMv2_0341_5_105
Type: CAZyme
Location: 124332 - 125978 (-)
Gene ID: HRGMv2_0341_5_106
Type: sulfatase
Location: 126076 - 126882 (-)
Gene ID: HRGMv2_0341_5_107
Type: CAZyme
Location: 126940 - 127674 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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