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Genome Details

Selected Rep_genome_ID: HRGMv2_0128
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
UBA6398
→
Species
UBA6398 sp900550635
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
C171.bin_24 2,696,298 95.96% 0.37% China(Inner Mongolia) Asia IMGG
GCA_021628145.1_ASM2162814v1_genomic 2,539,805 95.94% 0.5% NA Africa H3AfricaPhase1
GH210_101 2,616,299 95.99% 0.37% NA Africa H3AfricaPhase2
HRGMv2_0128 2,590,721 95.58% 0% UK Europe HRGM
Rep_119 2,735,644 93.1691% 0.495663% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0128_CGC22 CGCFAM_00001 Yes 8 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0128_CGC25 CGCFAM_00002 Yes 6 3
HRGMv2_0128_CGC43 CGCFAM_00002 Yes 11 4
HRGMv2_0128_CGC13 CGCFAM_00018 Yes 5 2
HRGMv2_0128_CGC26 CGCFAM_00039 Yes 6 2
HRGMv2_0128_CGC11 CGCFAM_00071 Yes 5 3
HRGMv2_0128_CGC30 CGCFAM_00081 Yes 11 1
HRGMv2_0128_CGC41 CGCFAM_00200 Yes 5 1
HRGMv2_0128_CGC9 CGCFAM_00321 Yes 5 2
HRGMv2_0128_CGC23 CGCFAM_00589 Yes 3 1
HRGMv2_0128_CGC28 CGCFAM_00690 Yes 3 1
HRGMv2_0128_CGC7 CGCFAM_00775 Yes 3 1
HRGMv2_0128_CGC19 CGCFAM_00777 Yes 5 1
HRGMv2_0128_CGC40 CGCFAM_01606 Yes 3 2
HRGMv2_0128_CGC21 CGCFAM_01796 Yes 6 1
HRGMv2_0128_CGC32 CGCFAM_02328 Yes 3 1
HRGMv2_0128_CGC1 CGCFAM_04346 Yes 4 1
HRGMv2_0128_CGC15 CGCFAM_04797 Yes 3 1
HRGMv2_0128_CGC20 CGCFAM_09117 Yes 5 3
HRGMv2_0128_CGC10 CGCFAM_09495 Yes 4 2
HRGMv2_0128_CGC38 CGCFAM_09496 Yes 3 1
HRGMv2_0128_CGC4 CGCFAM_09497 Yes 7 1
HRGMv2_0128_CGC5 CGCFAM_09498 Yes 5 2
Top CAZyme Families