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Cluster: HRGMv2_0128_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0128_47 HRGMv2_0128_47_1 2 691 + 8.A.3.3.4
NULL(UNKNOWN) HRGMv2_0128_47 HRGMv2_0128_47_2 697 2238 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0128_47 HRGMv2_0128_47_3 2306 3301 + Acyl_transf_3
CAZyme HRGMv2_0128_47 HRGMv2_0128_47_4 3298 4353 + GT2
pfam HRGMv2_0128_47 HRGMv2_0128_47_5 4440 5501 + FrhB_FdhB_C
pfam HRGMv2_0128_47 HRGMv2_0128_47_6 5504 6574 + PS_pyruv_trans
CAZyme HRGMv2_0128_47 HRGMv2_0128_47_7 6581 7627 + GT92
CAZyme HRGMv2_0128_47 HRGMv2_0128_47_8 7711 8487 + GT32
pfam HRGMv2_0128_47 HRGMv2_0128_47_9 8487 9692 + Wzy_C
NULL(UNKNOWN) HRGMv2_0128_47 HRGMv2_0128_47_10 10020 10688 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0128_47 HRGMv2_0128_47_11 10988 12082 + GT4
Gene ID: HRGMv2_0128_47_1
Type: TC
Location: 2 - 691 (+)
Gene ID: HRGMv2_0128_47_2
Type:
Location: 697 - 2238 (+)
Gene ID: HRGMv2_0128_47_3
Type: pfam
Location: 2306 - 3301 (+)
Gene ID: HRGMv2_0128_47_4
Type: CAZyme
Location: 3298 - 4353 (+)
Gene ID: HRGMv2_0128_47_5
Type: pfam
Location: 4440 - 5501 (+)
Gene ID: HRGMv2_0128_47_6
Type: pfam
Location: 5504 - 6574 (+)
Gene ID: HRGMv2_0128_47_7
Type: CAZyme
Location: 6581 - 7627 (+)
Gene ID: HRGMv2_0128_47_8
Type: CAZyme
Location: 7711 - 8487 (+)
Gene ID: HRGMv2_0128_47_9
Type: pfam
Location: 8487 - 9692 (+)
Gene ID: HRGMv2_0128_47_10
Type:
Location: 10020 - 10688 (+)
Gene ID: HRGMv2_0128_47_11
Type: CAZyme
Location: 10988 - 12082 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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