PROTEIN: HRGMv2_0128_47_2
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Protein File & Metadata
Source:
HRGMv2_0128_47_2.pdb
Genome ID:
Protein ID:
HRGMv2_0128_47_2
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Protein Sequence
MTNSRTSKSI KNAKVALIFY FAQLILGFFS RKAFFDYLGS EFLGLNTTAS NLLGFLNLAE 60 LGVSAAICYF LYQPLYEKDY DKLNKLVTIQ GWIYRKVAYI IIGASLVLMS FFPMIFSKTS 120 LPLWYAYCMF GVLLFSSILG YFYNYKQIVL YADQKNYKIQ QYVQGTGILK MILQIIAVSY 180 LPNPFWGWLV LEAISAVVTT IILNFILKKE YPWLKTSTKE GKAYIKEYPE VLKKTGQVFF 240 HRIGAVILGQ SSPLIIYGFT SLTTVALFGN YMLIINKVGF LLTSIFSSIG AAIGDLVATK 300 NQQRIIKVFW ELYDSRLCIS VVVLICLFHL TNPFITIWLG KDFCLSKTFL LLYIMLSSIS 360 MTRATVDSYI SAHGLYKDIW APITEAVINV SMSVLLGTYF GLNGIIAGIL ISQVVIISIW 420 KPYFLFKAGL KISAKKYFIP VIHRYIIVSV LFVAFHFLFL FLDIERIESV KDFILNAVVV 480 CISSLIVVGI IFYVMFPGTR DFIERILLSL QAK 513
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 3 | 513 | 1 | 507 | 0.8625 |
0.8848 |
| AF-Q8DPI1-F1-model_v4 | 2 | 513 | 1 | 491 | 0.8398 |
0.879 |
| AF-A0A0H3GSJ3-F1-model_v4 | 3 | 513 | 1 | 477 | 0.8371 |
0.8853 |
| AF-Q2G262-F1-model_v4 | 3 | 513 | 1 | 476 | 0.8354 |
0.884 |
| AF-H9L497-F1-model_v4 | 1 | 513 | 1 | 483 | 0.8304 |
0.8805 |
| AF-P77377-F1-model_v4 | 1 | 513 | 1 | 483 | 0.8294 |
0.8791 |
| AF-K7LFK0-F1-model_v4 | 1 | 513 | 5 | 518 | 0.8141 |
0.8377 |
| AF-P0AF16-F1-model_v4 | 6 | 509 | 1 | 511 | 0.8108 |
0.8434 |
| AF-Q9I1M8-F1-model_v4 | 7 | 505 | 1 | 469 | 0.8107 |
0.865 |
| AF-Q9HVM2-F1-model_v4 | 4 | 509 | 1 | 512 | 0.8107 |
0.8411 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 513 | 1 | 512 | 0.82 |
0.8437 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 513 | 34 | 545 | 0.7897 |
0.8344 |
| QNU38870.1 | GT4 | 6 | 513 | 1 | 475 | 0.7241 |
0.8551 |
| QJC17489.1 | GT2 | 1 | 513 | 338 | 843 | 0.6786 |
0.8628 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 513 | 1 | 589 | 0.6751 |
0.8478 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 513 | 1 | 593 | 0.6602 |
0.8479 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 513 | 7 | 653 | 0.6592 |
0.8649 |
| AF-A1R6N5-F1-model_v4 | GT2 | 1 | 513 | 4 | 497 | 0.6557 |
0.8528 |
| AF-A0A5Q0NSF2-F1-model_v4 | GT2 | 2 | 513 | 1 | 844 | 0.6504 |
0.8263 |
| A0A0C5BEZ8 | GT4 | 7 | 513 | 1 | 611 | 0.6467 |
0.8367 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 513 | 1 | 512 | 0.82 |
0.8437 |
| A0A160T2N7 | GT28 | 1 | 513 | 34 | 545 | 0.7897 |
0.8344 |
| QNU38870.1 | GT4 | 6 | 513 | 1 | 475 | 0.7241 |
0.8551 |
| QJC17489.1 | GT2 | 1 | 513 | 338 | 843 | 0.6786 |
0.8628 |
| A0A3T0RPT8 | GT4 | 1 | 513 | 1 | 589 | 0.6751 |
0.8478 |
| A0A3Q9G719 | GT4 | 1 | 513 | 1 | 593 | 0.6602 |
0.8479 |
| D1BIF1 | GT4 | 1 | 513 | 7 | 653 | 0.6592 |
0.8649 |
| A0A5Q0NSF2 | GT2 | 2 | 513 | 1 | 844 | 0.6504 |
0.8263 |
| A0A0C5BEZ8 | GT4 | 7 | 513 | 1 | 611 | 0.6467 |
0.8367 |
| F9ZKY1 | GT2 | 1 | 512 | 17 | 520 | 0.6458 |
0.8258 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6nc6-assembly2.cif.gz_B | 10 | 504 | 1 | 461 | 0.7881 |
0.8478 |
| 7waw-assembly1.cif.gz_A | 10 | 506 | 1 | 496 | 0.784 |
0.8197 |
| 7wag-assembly1.cif.gz_A | 6 | 509 | 2 | 510 | 0.7411 |
0.7845 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 3 | 513 | 1 | 507 | 0.8625 |
0.8848 |
| AF-P71060-F1-model_v4 | 6 | 513 | 1 | 499 | 0.8518 |
0.8866 |
| AF-D4GU68-F1-model_v4 | 3 | 513 | 1 | 472 | 0.8424 |
0.8933 |
| AF-D4GYG8-F1-model_v4 | 6 | 513 | 1 | 476 | 0.841 |
0.889 |
| AF-Q48457-F1-model_v4 | 1 | 513 | 1 | 485 | 0.835 |
0.877 |
| AF-P77377-F1-model_v4 | 1 | 513 | 1 | 483 | 0.8294 |
0.8791 |
| AF-O83529-F1-model_v4 | 1 | 513 | 2 | 526 | 0.828 |
0.8576 |
| AF-O34238-F1-model_v4 | 1 | 509 | 1 | 525 | 0.8273 |
0.8608 |
| AF-O32273-F1-model_v4 | 1 | 513 | 1 | 482 | 0.8251 |
0.8694 |
| AF-P33699-F1-model_v4 | 4 | 513 | 5 | 487 | 0.8226 |
0.8751 |