dbCAN Logo

Cluster: HRGMv2_0128_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0128_11 HRGMv2_0128_11_29 38901 40295 + GH29
CAZyme HRGMv2_0128_11 HRGMv2_0128_11_30 40372 41454 + GH43_33
NULL(UNKNOWN) HRGMv2_0128_11 HRGMv2_0128_11_31 41862 42089 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0128_11 HRGMv2_0128_11_32 42409 45396 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0128_11 HRGMv2_0128_11_33 45408 48812 + 1.B.14.6.1
pfam HRGMv2_0128_11 HRGMv2_0128_11_34 48825 50597 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) HRGMv2_0128_11 HRGMv2_0128_11_35 50808 52592 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0128_11 HRGMv2_0128_11_36 52624 56034 + 1.B.14.6.1
Gene ID: HRGMv2_0128_11_29
Type: CAZyme
Location: 38901 - 40295 (+)
Gene ID: HRGMv2_0128_11_30
Type: CAZyme
Location: 40372 - 41454 (+)
Gene ID: HRGMv2_0128_11_31
Type:
Location: 41862 - 42089 (+)
Gene ID: HRGMv2_0128_11_32
Type:
Location: 42409 - 45396 (+)
Gene ID: HRGMv2_0128_11_33
Type: TC
Location: 45408 - 48812 (+)
Gene ID: HRGMv2_0128_11_34
Type: pfam
Location: 48825 - 50597 (+)
Gene ID: HRGMv2_0128_11_35
Type:
Location: 50808 - 52592 (+)
Gene ID: HRGMv2_0128_11_36
Type: TC
Location: 52624 - 56034 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List