Cluster: HRGMv2_0128_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0128
- CGC Family ID: CGCFAM_00018
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0128_6 | HRGMv2_0128_6_7 | 7555 | 8649 | + | GT4 |
| TC | HRGMv2_0128_6 | HRGMv2_0128_6_8 | 8655 | 9728 | + | 9.B.18.2.1 |
| pfam | HRGMv2_0128_6 | HRGMv2_0128_6_9 | 9743 | 10882 | + | Epimerase_2 |
| pfam | HRGMv2_0128_6 | HRGMv2_0128_6_10 | 10886 | 11746 | + | Epimerase | RmlD_sub_bind |
| CAZyme | HRGMv2_0128_6 | HRGMv2_0128_6_11 | 11746 | 12966 | + | GT4 |
Gene ID: HRGMv2_0128_6_7
Type: CAZyme
Location: 7555 - 8649 (+)
Type: CAZyme
Location: 7555 - 8649 (+)
Gene ID: HRGMv2_0128_6_8
Type: TC
Location: 8655 - 9728 (+)
Type: TC
Location: 8655 - 9728 (+)
Gene ID: HRGMv2_0128_6_9
Type: pfam
Location: 9743 - 10882 (+)
Type: pfam
Location: 9743 - 10882 (+)
Gene ID: HRGMv2_0128_6_10
Type: pfam
Location: 10886 - 11746 (+)
Type: pfam
Location: 10886 - 11746 (+)
Gene ID: HRGMv2_0128_6_11
Type: CAZyme
Location: 11746 - 12966 (+)
Type: CAZyme
Location: 11746 - 12966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
UBA6398
Species
UBA6398 sp900550635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.