dbCAN HGM

Cluster: HRGMv2_0128_CGC30

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0128_23	HRGMv2_0128_23_26	28257	29732	-	3.D.1.2.1
TC	HRGMv2_0128_23	HRGMv2_0128_23_27	29736	31253	-	3.D.1.2.1
TC	HRGMv2_0128_23	HRGMv2_0128_23_28	31278	33182	-	3.D.1.2.1
TC	HRGMv2_0128_23	HRGMv2_0128_23_29	33220	33528	-	3.D.9.1.1
pfam	HRGMv2_0128_23	HRGMv2_0128_23_30	33543	34058	-	Oxidored_q3
STP	HRGMv2_0128_23	HRGMv2_0128_23_31	34072	34632	-	Fer4 \| Fer4
TC	HRGMv2_0128_23	HRGMv2_0128_23_32	34655	35728	-	3.D.1.5.1
TC	HRGMv2_0128_23	HRGMv2_0128_23_33	35752	37332	-	3.D.1.5.1
TC	HRGMv2_0128_23	HRGMv2_0128_23_34	37329	37925	-	3.D.1.3.1
TC	HRGMv2_0128_23	HRGMv2_0128_23_35	37916	38254	-	3.D.1.8.1
CAZyme	HRGMv2_0128_23	HRGMv2_0128_23_36	38815	40464	+	GH110

Gene ID: HRGMv2_0128_23_26
Type: TC
Location: 28257 - 29732 (-)

Gene ID: HRGMv2_0128_23_27
Type: TC
Location: 29736 - 31253 (-)

Gene ID: HRGMv2_0128_23_28
Type: TC
Location: 31278 - 33182 (-)

Gene ID: HRGMv2_0128_23_29
Type: TC
Location: 33220 - 33528 (-)

Gene ID: HRGMv2_0128_23_30
Type: pfam
Location: 33543 - 34058 (-)

Gene ID: HRGMv2_0128_23_31
Type: STP
Location: 34072 - 34632 (-)

Gene ID: HRGMv2_0128_23_32
Type: TC
Location: 34655 - 35728 (-)

Gene ID: HRGMv2_0128_23_33
Type: TC
Location: 35752 - 37332 (-)

Gene ID: HRGMv2_0128_23_34
Type: TC
Location: 37329 - 37925 (-)

Gene ID: HRGMv2_0128_23_35
Type: TC
Location: 37916 - 38254 (-)

Gene ID: HRGMv2_0128_23_36
Type: CAZyme
Location: 38815 - 40464 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0128_23_27	vegan > omnivore	1.00312	0.00181
HRGMv2_0128_23_34	vegan > omnivore	1.57246	0.00181
HRGMv2_0128_23_35	vegan > omnivore	1.23958	0.00181
HRGMv2_0128_23_35	vegetarian > omnivore	1.07056	0.01057