Genome Details
Selected Rep_genome_ID: CokerMO_2019_SRR8692180_bin.26
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CokerMO_2019_SRR8692180_bin.26 | 2,356,303 | 99.19% | 0% | US | North America | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CokerMO_2019_SRR8692180_bin.26_CGC10 | CGCFAM_00012 | Yes | 4 | 1 | host glycan/beta-glucan |
| CokerMO_2019_SRR8692180_bin.26_CGC4 | CGCFAM_00066 | Yes | 4 | 1 | beta-mannan |
| CokerMO_2019_SRR8692180_bin.26_CGC31 | CGCFAM_00243 | Yes | 10 | 3 | host glycan |
| CokerMO_2019_SRR8692180_bin.26_CGC29 | CGCFAM_00464 | Yes | 5 | 3 | |
| CokerMO_2019_SRR8692180_bin.26_CGC2 | CGCFAM_00990 | Yes | 6 | 3 | |
| CokerMO_2019_SRR8692180_bin.26_CGC24 | CGCFAM_01032 | Yes | 4 | 1 | |
| CokerMO_2019_SRR8692180_bin.26_CGC22 | CGCFAM_02552 | Yes | 6 | 1 | |
| CokerMO_2019_SRR8692180_bin.26_CGC20 | CGCFAM_02767 | Yes | 4 | 1 | |
| CokerMO_2019_SRR8692180_bin.26_CGC25 | CGCFAM_03692 | Yes | 7 | 1 | |
| CokerMO_2019_SRR8692180_bin.26_CGC30 | CGCFAM_04857 | Yes | 4 | 1 | |
| CokerMO_2019_SRR8692180_bin.26_CGC15 | CGCFAM_05174 | Yes | 11 | 6 | |
| CokerMO_2019_SRR8692180_bin.26_CGC13 | CGCFAM_09143 | Yes | 8 | 1 | |
| CokerMO_2019_SRR8692180_bin.26_CGC27 | CGCFAM_09245 | Yes | 9 | 1 | |
| CokerMO_2019_SRR8692180_bin.26_CGC6 | CGCFAM_09246 | Yes | 6 | 2 | |
| CokerMO_2019_SRR8692180_bin.26_CGC7 | CGCFAM_09247 | Yes | 12 | 1 |
Top CAZyme Families