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Cluster: CokerMO_2019_SRR8692180_bin.26_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692180_bin.26_k141_35180 CokerMO_2019_SRR8692180_bin.26_k141_35180_6 3913 5007 - 3.D.1.4.2
pfam CokerMO_2019_SRR8692180_bin.26_k141_35180 CokerMO_2019_SRR8692180_bin.26_k141_35180_7 5010 5765 - Complex1_30kDa
TC CokerMO_2019_SRR8692180_bin.26_k141_35180 CokerMO_2019_SRR8692180_bin.26_k141_35180_8 5766 6281 - 3.D.1.4.2
TC CokerMO_2019_SRR8692180_bin.26_k141_35180 CokerMO_2019_SRR8692180_bin.26_k141_35180_9 6294 9158 - 3.D.1.4.2
CAZyme CokerMO_2019_SRR8692180_bin.26_k141_35180 CokerMO_2019_SRR8692180_bin.26_k141_35180_10 9508 10884 - GH4
TC CokerMO_2019_SRR8692180_bin.26_k141_35180 CokerMO_2019_SRR8692180_bin.26_k141_35180_11 10945 12564 - 4.A.1.1.16
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_35180_6
Type: TC
Location: 3913 - 5007 (-)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_35180_7
Type: pfam
Location: 5010 - 5765 (-)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_35180_8
Type: TC
Location: 5766 - 6281 (-)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_35180_9
Type: TC
Location: 6294 - 9158 (-)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_35180_10
Type: CAZyme
Location: 9508 - 10884 (-)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_35180_11
Type: TC
Location: 10945 - 12564 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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