Genome Details
Selected Rep_genome_ID: CGMR085333
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
WRDF01
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR085333 | 2,600,441 | 94.34% | 0.72% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR085333_CGC17 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR085333_CGC27 | CGCFAM_00001 | Yes | 11 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR085333_CGC5 | CGCFAM_00016 | Yes | 12 | 5 | host glycan |
| CGMR085333_CGC25 | CGCFAM_00062 | Yes | 6 | 2 | beta-glucan |
| CGMR085333_CGC20 | CGCFAM_00079 | Yes | 10 | 5 | pectin |
| CGMR085333_CGC16 | CGCFAM_00213 | Yes | 5 | 2 | beta-glucan |
| CGMR085333_CGC4 | CGCFAM_00404 | Yes | 8 | 4 | |
| CGMR085333_CGC22 | CGCFAM_00595 | Yes | 6 | 2 | |
| CGMR085333_CGC1 | CGCFAM_00697 | Yes | 6 | 3 | |
| CGMR085333_CGC13 | CGCFAM_01008 | Yes | 4 | 1 | |
| CGMR085333_CGC9 | CGCFAM_01329 | Yes | 3 | 1 | |
| CGMR085333_CGC15 | CGCFAM_01383 | Yes | 3 | 1 | |
| CGMR085333_CGC10 | CGCFAM_01815 | Yes | 10 | 5 | |
| CGMR085333_CGC14 | CGCFAM_02306 | Yes | 3 | 2 | |
| CGMR085333_CGC3 | CGCFAM_02743 | Yes | 4 | 1 | |
| CGMR085333_CGC18 | CGCFAM_02804 | Yes | 7 | 5 | |
| CGMR085333_CGC6 | CGCFAM_04573 | Yes | 6 | 1 |
Top CAZyme Families