Cluster: CGMR085333_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR085333
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_494806 | k141_494806_3 | 2192 | 5170 | + | 1.B.14.6.1 |
| pfam | k141_494806 | k141_494806_4 | 5192 | 6721 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_494806 | k141_494806_5 | 6725 | 7981 | + | GH99 |
| CAZyme | k141_494806 | k141_494806_6 | 7990 | 9996 | + | GH97 |
Gene ID: k141_494806_3
Type: TC
Location: 2192 - 5170 (+)
Type: TC
Location: 2192 - 5170 (+)
Gene ID: k141_494806_4
Type: pfam
Location: 5192 - 6721 (+)
Type: pfam
Location: 5192 - 6721 (+)
Gene ID: k141_494806_5
Type: CAZyme
Location: 6725 - 7981 (+)
Type: CAZyme
Location: 6725 - 7981 (+)
Gene ID: k141_494806_6
Type: CAZyme
Location: 7990 - 9996 (+)
Type: CAZyme
Location: 7990 - 9996 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
WRDF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.