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Cluster: CGMR085333_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_335055 k141_335055_2 1038 4124 + 1.B.14.6.1
TC k141_335055 k141_335055_3 4136 5662 + 8.A.46.1.3
pfam k141_335055 k141_335055_4 5681 6553 + Laminin_G_3
CAZyme k141_335055 k141_335055_5 6564 8222 + GH144
CAZyme k141_335055 k141_335055_6 8318 10609 + GH3
CAZyme k141_335055 k141_335055_7 10697 12037 + GH144
pfam k141_335055 k141_335055_8 12331 13440 + Metallophos
TC k141_335055 k141_335055_9 13760 16246 - 1.B.14.6.14
CAZyme k141_335055 k141_335055_10 16813 18075 + GH171
CAZyme k141_335055 k141_335055_11 18062 20581 + GH20
Gene ID: k141_335055_2
Type: TC
Location: 1038 - 4124 (+)
Gene ID: k141_335055_3
Type: TC
Location: 4136 - 5662 (+)
Gene ID: k141_335055_4
Type: pfam
Location: 5681 - 6553 (+)
Gene ID: k141_335055_5
Type: CAZyme
Location: 6564 - 8222 (+)
Gene ID: k141_335055_6
Type: CAZyme
Location: 8318 - 10609 (+)
Gene ID: k141_335055_7
Type: CAZyme
Location: 10697 - 12037 (+)
Gene ID: k141_335055_8
Type: pfam
Location: 12331 - 13440 (+)
Gene ID: k141_335055_9
Type: TC
Location: 13760 - 16246 (-)
Gene ID: k141_335055_10
Type: CAZyme
Location: 16813 - 18075 (+)
Gene ID: k141_335055_11
Type: CAZyme
Location: 18062 - 20581 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
WRDF01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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