Cluster: CGMR085333_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR085333
- CGC Family ID: CGCFAM_00404
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_298213 | k141_298213_13 | 17101 | 18750 | + | GH33 |
| TC | k141_298213 | k141_298213_14 | 18805 | 22074 | + | 1.B.14.6.1 |
| pfam | k141_298213 | k141_298213_15 | 22095 | 23567 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_298213 | k141_298213_16 | 23554 | 24753 | + | GH33 |
| sulfatase | k141_298213 | k141_298213_17 | 24779 | 26431 | + | S1_30 |
| sulfatase | k141_298213 | k141_298213_18 | 26519 | 27169 | + | S1_16 |
| CAZyme | k141_298213 | k141_298213_19 | 27253 | 29343 | + | GH42 |
| CAZyme | k141_298213 | k141_298213_20 | 29418 | 31553 | + | GH3 |
Gene ID: k141_298213_13
Type: CAZyme
Location: 17101 - 18750 (+)
Type: CAZyme
Location: 17101 - 18750 (+)
Gene ID: k141_298213_14
Type: TC
Location: 18805 - 22074 (+)
Type: TC
Location: 18805 - 22074 (+)
Gene ID: k141_298213_15
Type: pfam
Location: 22095 - 23567 (+)
Type: pfam
Location: 22095 - 23567 (+)
Gene ID: k141_298213_16
Type: CAZyme
Location: 23554 - 24753 (+)
Type: CAZyme
Location: 23554 - 24753 (+)
Gene ID: k141_298213_17
Type: sulfatase
Location: 24779 - 26431 (+)
Type: sulfatase
Location: 24779 - 26431 (+)
Gene ID: k141_298213_18
Type: sulfatase
Location: 26519 - 27169 (+)
Type: sulfatase
Location: 26519 - 27169 (+)
Gene ID: k141_298213_19
Type: CAZyme
Location: 27253 - 29343 (+)
Type: CAZyme
Location: 27253 - 29343 (+)
Gene ID: k141_298213_20
Type: CAZyme
Location: 29418 - 31553 (+)
Type: CAZyme
Location: 29418 - 31553 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
WRDF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.