Genome Details
Selected Rep_genome_ID: CGMR073893
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus acidipiscis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR073893 | 2,377,305 | 97.91% | 2.36% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR073893_CGC8 | CGCFAM_00014 | Yes | 11 | 2 | host glycan |
| CGMR073893_CGC2 | CGCFAM_00336 | Yes | 11 | 3 | alpha-glucan |
| CGMR073893_CGC9 | CGCFAM_00339 | Yes | 7 | 1 | |
| CGMR073893_CGC23 | CGCFAM_00348 | Yes | 12 | 7 | |
| CGMR073893_CGC21 | CGCFAM_00456 | Yes | 11 | 3 | |
| CGMR073893_CGC28 | CGCFAM_00645 | Yes | 10 | 2 | |
| CGMR073893_CGC11 | CGCFAM_00979 | Yes | 3 | 1 | |
| CGMR073893_CGC36 | CGCFAM_01559 | Yes | 3 | 1 | |
| CGMR073893_CGC15 | CGCFAM_01816 | Yes | 6 | 1 | |
| CGMR073893_CGC17 | CGCFAM_02702 | Yes | 6 | 1 | |
| CGMR073893_CGC34 | CGCFAM_03692 | Yes | 4 | 1 | |
| CGMR073893_CGC19 | CGCFAM_05755 | Yes | 4 | 1 | |
| CGMR073893_CGC13 | CGCFAM_06476 | Yes | 6 | 2 | |
| CGMR073893_CGC5 | CGCFAM_08756 | Yes | 5 | 1 | |
| CGMR073893_CGC1 | CGCFAM_08957 | Yes | 12 | 1 | |
| CGMR073893_CGC3 | CGCFAM_08958 | Yes | 5 | 1 |
Top CAZyme Families