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Cluster: CGMR073893_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4957 k141_4957_48 48195 48545 + 4.A.3.1.3
CAZyme k141_4957 k141_4957_49 48549 49967 + GH1
TC k141_4957 k141_4957_50 50430 52199 + 4.A.3.1.1
TF k141_4957 k141_4957_51 52481 53467 - LacI
NULL(UNKNOWN) k141_4957 k141_4957_52 53740 53913 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_4957 k141_4957_53 54241 55650 - GH1
TC k141_4957 k141_4957_54 55698 56507 - 4.A.3.1.3
TC k141_4957 k141_4957_55 56498 57391 - 4.A.3.1.3
pfam k141_4957 k141_4957_56 57718 58140 + MGS
NULL(UNKNOWN) k141_4957 k141_4957_57 58262 58420 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_4957 k141_4957_58 58459 60570 - 9.A.8.1.6
Gene ID: k141_4957_48
Type: TC
Location: 48195 - 48545 (+)
Gene ID: k141_4957_49
Type: CAZyme
Location: 48549 - 49967 (+)
Gene ID: k141_4957_50
Type: TC
Location: 50430 - 52199 (+)
Gene ID: k141_4957_51
Type: TF
Location: 52481 - 53467 (-)
Gene ID: k141_4957_52
Type:
Location: 53740 - 53913 (+)
Gene ID: k141_4957_53
Type: CAZyme
Location: 54241 - 55650 (-)
Gene ID: k141_4957_54
Type: TC
Location: 55698 - 56507 (-)
Gene ID: k141_4957_55
Type: TC
Location: 56498 - 57391 (-)
Gene ID: k141_4957_56
Type: pfam
Location: 57718 - 58140 (+)
Gene ID: k141_4957_57
Type:
Location: 58262 - 58420 (-)
Gene ID: k141_4957_58
Type: TC
Location: 58459 - 60570 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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