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Cluster: CGMR073893_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11232 k141_11232_6 9350 10888 + 4.C.1.1.4
TF k141_11232 k141_11232_7 11138 11863 - GntR
CAZyme k141_11232 k141_11232_8 12021 13391 + GH1
TC k141_11232 k141_11232_9 13437 14786 + 4.A.3.2.9
TC k141_11232 k141_11232_10 14839 15162 + 4.A.3.2.4
TC k141_11232 k141_11232_11 15190 15516 + 4.A.3.2.4
pfam k141_11232 k141_11232_12 15633 16505 + ROK
TF k141_11232 k141_11232_13 16875 17585 - GntR
CAZyme k141_11232 k141_11232_14 17802 19175 + GH1
TC k141_11232 k141_11232_15 19189 20493 + 4.A.3.2.9
Gene ID: k141_11232_6
Type: TC
Location: 9350 - 10888 (+)
Gene ID: k141_11232_7
Type: TF
Location: 11138 - 11863 (-)
Gene ID: k141_11232_8
Type: CAZyme
Location: 12021 - 13391 (+)
Gene ID: k141_11232_9
Type: TC
Location: 13437 - 14786 (+)
Gene ID: k141_11232_10
Type: TC
Location: 14839 - 15162 (+)
Gene ID: k141_11232_11
Type: TC
Location: 15190 - 15516 (+)
Gene ID: k141_11232_12
Type: pfam
Location: 15633 - 16505 (+)
Gene ID: k141_11232_13
Type: TF
Location: 16875 - 17585 (-)
Gene ID: k141_11232_14
Type: CAZyme
Location: 17802 - 19175 (+)
Gene ID: k141_11232_15
Type: TC
Location: 19189 - 20493 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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