Cluster: CGMR073893_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR073893
- CGC Family ID: CGCFAM_00339
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4957 | k141_4957_72 | 78156 | 79553 | + | 3.D.10.1.6 |
| TC | k141_4957 | k141_4957_73 | 79822 | 81243 | + | 2.A.47.3.1 |
| TC | k141_4957 | k141_4957_74 | 81441 | 82547 | - | 3.A.1.1.20 |
| CAZyme | k141_4957 | k141_4957_75 | 82605 | 84449 | - | GH2 |
| NULL(UNKNOWN) | k141_4957 | k141_4957_76 | 84472 | 84852 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_4957 | k141_4957_77 | 84860 | 85702 | - | 3.A.1.1.36 |
| TC | k141_4957 | k141_4957_78 | 85721 | 86647 | - | 3.A.1.1.20 |
Gene ID: k141_4957_72
Type: TC
Location: 78156 - 79553 (+)
Type: TC
Location: 78156 - 79553 (+)
Gene ID: k141_4957_73
Type: TC
Location: 79822 - 81243 (+)
Type: TC
Location: 79822 - 81243 (+)
Gene ID: k141_4957_74
Type: TC
Location: 81441 - 82547 (-)
Type: TC
Location: 81441 - 82547 (-)
Gene ID: k141_4957_75
Type: CAZyme
Location: 82605 - 84449 (-)
Type: CAZyme
Location: 82605 - 84449 (-)
Gene ID: k141_4957_76
Type:
Location: 84472 - 84852 (-)
Type:
Location: 84472 - 84852 (-)
Gene ID: k141_4957_77
Type: TC
Location: 84860 - 85702 (-)
Type: TC
Location: 84860 - 85702 (-)
Gene ID: k141_4957_78
Type: TC
Location: 85721 - 86647 (-)
Type: TC
Location: 85721 - 86647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus acidipiscis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.