Cluster: CGMR073893_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR073893
- CGC Family ID: CGCFAM_06476
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1996 | k141_1996_46 | 49673 | 50983 | + | GT2 |
| CAZyme | k141_1996 | k141_1996_47 | 51002 | 52141 | + | GH8 |
| NULL(UNKNOWN) | k141_1996 | k141_1996_48 | 52138 | 52245 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_1996 | k141_1996_49 | 52530 | 52778 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_1996 | k141_1996_50 | 53037 | 55829 | + | 3.A.3.1.8 |
| TC | k141_1996 | k141_1996_51 | 56027 | 58600 | + | 2.A.1.3.35 |
Gene ID: k141_1996_46
Type: CAZyme
Location: 49673 - 50983 (+)
Type: CAZyme
Location: 49673 - 50983 (+)
Gene ID: k141_1996_47
Type: CAZyme
Location: 51002 - 52141 (+)
Type: CAZyme
Location: 51002 - 52141 (+)
Gene ID: k141_1996_48
Type:
Location: 52138 - 52245 (+)
Type:
Location: 52138 - 52245 (+)
Gene ID: k141_1996_49
Type:
Location: 52530 - 52778 (+)
Type:
Location: 52530 - 52778 (+)
Gene ID: k141_1996_50
Type: TC
Location: 53037 - 55829 (+)
Type: TC
Location: 53037 - 55829 (+)
Gene ID: k141_1996_51
Type: TC
Location: 56027 - 58600 (+)
Type: TC
Location: 56027 - 58600 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus acidipiscis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.