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Genome Details

Selected Rep_genome_ID: CGMR065917
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Lactiplantibacillus
→
Species
Lactiplantibacillus plantarum
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A171.CMAG_7 3,247,266 97.53% 2.93% China(Inner Mongolia) Asia IMGG
AG296_bin.29 3,082,649 98.77% 2.93% NA Africa H3AfricaPhase2
CGMR065917 3,139,748 99.38% 2.16% China Asia CGMR
CGMR097609 2,754,940 96.25% 4.94% China Asia CGMR
HRGMv2_2463 2,809,308 99.07% 2.179% South Korea Asia HRGM
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_H_1_1976.119 2,809,056 98.15% 2.16% NA Africa Hadza
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR065917_CGC11 CGCFAM_00004 Yes 7 4 alpha-glucan
CGMR065917_CGC31 CGCFAM_00042 Yes 6 1 beta-glucan
CGMR065917_CGC26 CGCFAM_00066 Yes 3 1 beta-mannan
CGMR065917_CGC24 CGCFAM_00255 Yes 13 2
CGMR065917_CGC30 CGCFAM_00453 Yes 5 1
CGMR065917_CGC25 CGCFAM_00456 Yes 8 3
CGMR065917_CGC8 CGCFAM_00585 Yes 21 7
CGMR065917_CGC10 CGCFAM_01076 Yes 3 1
CGMR065917_CGC29 CGCFAM_01120 Yes 9 2
CGMR065917_CGC7 CGCFAM_01192 Yes 10 2
CGMR065917_CGC27 CGCFAM_01290 Yes 3 1
CGMR065917_CGC15 CGCFAM_01335 Yes 4 1
CGMR065917_CGC4 CGCFAM_01819 Yes 4 2 galactan
CGMR065917_CGC23 CGCFAM_01960 Yes 3 1
CGMR065917_CGC32 CGCFAM_01999 Yes 5 1
CGMR065917_CGC20 CGCFAM_02916 Yes 9 3
CGMR065917_CGC12 CGCFAM_04480 Yes 3 1
CGMR065917_CGC14 CGCFAM_05732 Yes 6 1
CGMR065917_CGC36 CGCFAM_06376 Yes 6 1 beta-mannan
CGMR065917_CGC9 CGCFAM_07263 Yes 5 1
CGMR065917_CGC2 CGCFAM_08872 Yes 3 1
CGMR065917_CGC21 CGCFAM_08873 Yes 4 2
CGMR065917_CGC22 CGCFAM_08874 Yes 5 1
CGMR065917_CGC33 CGCFAM_08875 Yes 15 3
CGMR065917_CGC35 CGCFAM_08876 Yes 22 8
Top CAZyme Families