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Cluster: CGMR065917_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_101572 k141_101572_20 24078 24812 - GT2
TF k141_101572 k141_101572_21 24905 25612 - GntR
TC k141_101572 k141_101572_22 25807 26124 + 4.A.3.2.4
TC k141_101572 k141_101572_23 26225 26572 + 4.A.3.2.8
CAZyme k141_101572 k141_101572_24 26766 28205 + GH1
CAZyme k141_101572 k141_101572_25 28223 29665 + GH1
STP k141_101572 k141_101572_26 30175 31485 + PALP
TC k141_101572 k141_101572_27 31705 32448 + 3.A.1.102.1
TC k141_101572 k141_101572_28 32426 33676 + 3.A.1.105.6
Gene ID: k141_101572_20
Type: CAZyme
Location: 24078 - 24812 (-)
Gene ID: k141_101572_21
Type: TF
Location: 24905 - 25612 (-)
Gene ID: k141_101572_22
Type: TC
Location: 25807 - 26124 (+)
Gene ID: k141_101572_23
Type: TC
Location: 26225 - 26572 (+)
Gene ID: k141_101572_24
Type: CAZyme
Location: 26766 - 28205 (+)
Gene ID: k141_101572_25
Type: CAZyme
Location: 28223 - 29665 (+)
Gene ID: k141_101572_26
Type: STP
Location: 30175 - 31485 (+)
Gene ID: k141_101572_27
Type: TC
Location: 31705 - 32448 (+)
Gene ID: k141_101572_28
Type: TC
Location: 32426 - 33676 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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