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Cluster: CGMR065917_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_47327 k141_47327_6 7265 8287 - GT4
CAZyme k141_47327 k141_47327_7 8363 9541 - GT4
TC k141_47327 k141_47327_8 10079 11809 - 8.A.7.1.1
STP k141_47327 k141_47327_9 11809 12075 - PTS-HPr
NULL(UNKNOWN) k141_47327 k141_47327_10 12225 12422 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_47327 k141_47327_11 13067 15133 + 3.A.9.1.2
pfam k141_47327 k141_47327_12 15248 15808 - Phage_integrase
TF k141_47327 k141_47327_13 15993 16382 - MarR
TC k141_47327 k141_47327_14 16923 17888 - 3.A.1.5.25
TC k141_47327 k141_47327_15 17895 18974 - 3.A.1.5.25
TC k141_47327 k141_47327_16 18990 20024 - 3.A.1.5.25
TC k141_47327 k141_47327_17 20028 20957 - 3.A.1.5.19
TC k141_47327 k141_47327_18 21115 22758 - 3.A.1.5.25
Gene ID: k141_47327_6
Type: CAZyme
Location: 7265 - 8287 (-)
Gene ID: k141_47327_7
Type: CAZyme
Location: 8363 - 9541 (-)
Gene ID: k141_47327_8
Type: TC
Location: 10079 - 11809 (-)
Gene ID: k141_47327_9
Type: STP
Location: 11809 - 12075 (-)
Gene ID: k141_47327_10
Type:
Location: 12225 - 12422 (-)
Gene ID: k141_47327_11
Type: TC
Location: 13067 - 15133 (+)
Gene ID: k141_47327_12
Type: pfam
Location: 15248 - 15808 (-)
Gene ID: k141_47327_13
Type: TF
Location: 15993 - 16382 (-)
Gene ID: k141_47327_14
Type: TC
Location: 16923 - 17888 (-)
Gene ID: k141_47327_15
Type: TC
Location: 17895 - 18974 (-)
Gene ID: k141_47327_16
Type: TC
Location: 18990 - 20024 (-)
Gene ID: k141_47327_17
Type: TC
Location: 20028 - 20957 (-)
Gene ID: k141_47327_18
Type: TC
Location: 21115 - 22758 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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