Genome Details
Selected Rep_genome_ID: CGMR065917
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Species
Lactiplantibacillus plantarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A171.CMAG_7 | 3,247,266 | 97.53% | 2.93% | China(Inner Mongolia) | Asia | IMGG |
| AG296_bin.29 | 3,082,649 | 98.77% | 2.93% | NA | Africa | H3AfricaPhase2 |
| CGMR065917 | 3,139,748 | 99.38% | 2.16% | China | Asia | CGMR |
| CGMR097609 | 2,754,940 | 96.25% | 4.94% | China | Asia | CGMR |
| HRGMv2_2463 | 2,809,308 | 99.07% | 2.179% | South Korea | Asia | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_H_1_1976.119 | 2,809,056 | 98.15% | 2.16% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR065917_CGC6 | CGCFAM_08877 | Yes | 15 | 5 |
Top CAZyme Families