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Cluster: CGMR065917_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_53085 k141_53085_250 274733 276409 - GH13_31
pfam k141_53085 k141_53085_251 276734 278443 + GmrSD_N | GmrSD_C
CAZyme k141_53085 k141_53085_252 278576 279961 - GH1
pfam k141_53085 k141_53085_253 279973 280851 - ROK
CAZyme k141_53085 k141_53085_254 280851 283550 - GH38
CAZyme k141_53085 k141_53085_255 283557 284846 - GH125
TF k141_53085 k141_53085_256 284994 286058 + GntR
CAZyme k141_53085 k141_53085_257 286064 288211 + GH92
TC k141_53085 k141_53085_258 288458 289594 - 3.A.1.1.20
pfam k141_53085 k141_53085_259 289845 290708 - ROK
TF k141_53085 k141_53085_260 290804 292264 - HTH_AraC | HTH_AraC
TC k141_53085 k141_53085_261 292264 293976 - 9.B.33.1.1
pfam k141_53085 k141_53085_262 293977 294588 - DUF624
CAZyme k141_53085 k141_53085_263 294661 296286 - GH13_31
STP k141_53085 k141_53085_264 296389 297861 - SBP_bac_1
TC k141_53085 k141_53085_265 297951 298868 - 3.A.1.1.29
TC k141_53085 k141_53085_266 298881 299843 - 3.A.1.1.29
CAZyme k141_53085 k141_53085_267 300179 302023 - GH20
TF k141_53085 k141_53085_268 302195 303022 - HTH_AraC | HTH_AraC
TC k141_53085 k141_53085_269 303151 304899 + 3.A.1.106.3
TC k141_53085 k141_53085_270 304901 306691 + 3.A.1.106.3
Gene ID: k141_53085_250
Type: CAZyme
Location: 274733 - 276409 (-)
Gene ID: k141_53085_251
Type: pfam
Location: 276734 - 278443 (+)
Gene ID: k141_53085_252
Type: CAZyme
Location: 278576 - 279961 (-)
Gene ID: k141_53085_253
Type: pfam
Location: 279973 - 280851 (-)
Gene ID: k141_53085_254
Type: CAZyme
Location: 280851 - 283550 (-)
Gene ID: k141_53085_255
Type: CAZyme
Location: 283557 - 284846 (-)
Gene ID: k141_53085_256
Type: TF
Location: 284994 - 286058 (+)
Gene ID: k141_53085_257
Type: CAZyme
Location: 286064 - 288211 (+)
Gene ID: k141_53085_258
Type: TC
Location: 288458 - 289594 (-)
Gene ID: k141_53085_259
Type: pfam
Location: 289845 - 290708 (-)
Gene ID: k141_53085_260
Type: TF
Location: 290804 - 292264 (-)
Gene ID: k141_53085_261
Type: TC
Location: 292264 - 293976 (-)
Gene ID: k141_53085_262
Type: pfam
Location: 293977 - 294588 (-)
Gene ID: k141_53085_263
Type: CAZyme
Location: 294661 - 296286 (-)
Gene ID: k141_53085_264
Type: STP
Location: 296389 - 297861 (-)
Gene ID: k141_53085_265
Type: TC
Location: 297951 - 298868 (-)
Gene ID: k141_53085_266
Type: TC
Location: 298881 - 299843 (-)
Gene ID: k141_53085_267
Type: CAZyme
Location: 300179 - 302023 (-)
Gene ID: k141_53085_268
Type: TF
Location: 302195 - 303022 (-)
Gene ID: k141_53085_269
Type: TC
Location: 303151 - 304899 (+)
Gene ID: k141_53085_270
Type: TC
Location: 304901 - 306691 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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