Genome Details
Selected Rep_genome_ID: CGMR049670
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900549685
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR049670 | 2,522,657 | 100% | 0.48% | China | Asia | CGMR |
| HRGMv2_0364 | 2,330,285 | 96.72% | 1.469% | United Kingdom | Europe | HRGM |
| MGYG000003018 | 2,600,623 | 93.68% | 2.4% | China | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR049670_CGC33 | CGCFAM_00915 | Yes | 16 | 1 | |
| CGMR049670_CGC19 | CGCFAM_01217 | Yes | 6 | 3 | |
| CGMR049670_CGC10 | CGCFAM_01302 | Yes | 3 | 1 | |
| CGMR049670_CGC3 | CGCFAM_01376 | Yes | 4 | 1 | |
| CGMR049670_CGC2 | CGCFAM_01423 | Yes | 9 | 4 | |
| CGMR049670_CGC6 | CGCFAM_01971 | Yes | 4 | 1 | |
| CGMR049670_CGC14 | CGCFAM_02153 | Yes | 4 | 1 | |
| CGMR049670_CGC25 | CGCFAM_02163 | Yes | 5 | 1 | |
| CGMR049670_CGC7 | CGCFAM_03321 | Yes | 3 | 1 | |
| CGMR049670_CGC11 | CGCFAM_03645 | Yes | 6 | 2 | |
| CGMR049670_CGC32 | CGCFAM_03829 | Yes | 4 | 2 | |
| CGMR049670_CGC28 | CGCFAM_04394 | Yes | 4 | 2 | |
| CGMR049670_CGC13 | CGCFAM_05605 | Yes | 12 | 1 | |
| CGMR049670_CGC8 | CGCFAM_05606 | Yes | 4 | 1 | |
| CGMR049670_CGC15 | CGCFAM_07948 | Yes | 5 | 1 | |
| CGMR049670_CGC5 | CGCFAM_08613 | Yes | 4 | 1 | |
| CGMR049670_CGC21 | CGCFAM_08643 | Yes | 7 | 2 |
Top CAZyme Families