Cluster: CGMR049670_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR049670
- CGC Family ID: CGCFAM_03829
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_30754 | k141_30754_11 | 12405 | 14051 | + | GH20 |
| CAZyme | k141_30754 | k141_30754_12 | 14179 | 15816 | + | GH20 |
| STP | k141_30754 | k141_30754_13 | 16195 | 17055 | - | Sigma70_r2 | Sigma70_r3 | Sigma70_r4 |
| TC | k141_30754 | k141_30754_14 | 17159 | 18667 | - | 2.A.102.4.10 |
Gene ID: k141_30754_11
Type: CAZyme
Location: 12405 - 14051 (+)
Type: CAZyme
Location: 12405 - 14051 (+)
Gene ID: k141_30754_12
Type: CAZyme
Location: 14179 - 15816 (+)
Type: CAZyme
Location: 14179 - 15816 (+)
Gene ID: k141_30754_13
Type: STP
Location: 16195 - 17055 (-)
Type: STP
Location: 16195 - 17055 (-)
Gene ID: k141_30754_14
Type: TC
Location: 17159 - 18667 (-)
Type: TC
Location: 17159 - 18667 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900549685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.