Cluster: CGMR049670_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR049670
- CGC Family ID: CGCFAM_08643
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_68135 | k141_68135_155 | 204638 | 205678 | + | CBM50 |
| TC | k141_68135 | k141_68135_156 | 205701 | 206312 | + | 2.A.76.1.7 |
| pfam | k141_68135 | k141_68135_157 | 206306 | 206800 | - | GtrA_DPMS_TM |
| pfam | k141_68135 | k141_68135_158 | 206797 | 208821 | - | Helicase_C | ResIII | UvrB | UvrB_inter |
| TC | k141_68135 | k141_68135_159 | 208911 | 209510 | + | 2.A.107.1.1 |
| pfam | k141_68135 | k141_68135_160 | 209546 | 211537 | + | Toprim | Zn_ribbon_DnaG | DNAG_N | DnaB_bind | Toprim_2 | Toprim_3 | Toprim_4 |
| CAZyme | k141_68135 | k141_68135_161 | 211915 | 213762 | - | GH2 |
Gene ID: k141_68135_155
Type: CAZyme
Location: 204638 - 205678 (+)
Type: CAZyme
Location: 204638 - 205678 (+)
Gene ID: k141_68135_156
Type: TC
Location: 205701 - 206312 (+)
Type: TC
Location: 205701 - 206312 (+)
Gene ID: k141_68135_157
Type: pfam
Location: 206306 - 206800 (-)
Type: pfam
Location: 206306 - 206800 (-)
Gene ID: k141_68135_158
Type: pfam
Location: 206797 - 208821 (-)
Type: pfam
Location: 206797 - 208821 (-)
Gene ID: k141_68135_159
Type: TC
Location: 208911 - 209510 (+)
Type: TC
Location: 208911 - 209510 (+)
Gene ID: k141_68135_160
Type: pfam
Location: 209546 - 211537 (+)
Type: pfam
Location: 209546 - 211537 (+)
Gene ID: k141_68135_161
Type: CAZyme
Location: 211915 - 213762 (-)
Type: CAZyme
Location: 211915 - 213762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900549685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.