Cluster: CGMR049670_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR049670
- CGC Family ID: CGCFAM_02153
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_137374 | k141_137374_39 | 58785 | 59645 | - | 2.A.64.3.2 |
| pfam | k141_137374 | k141_137374_40 | 59719 | 59949 | - | TatA_B_E |
| NULL(UNKNOWN) | k141_137374 | k141_137374_41 | 59967 | 60791 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_137374 | k141_137374_42 | 60879 | 63656 | - | CBM67 | GH78 |
Gene ID: k141_137374_39
Type: TC
Location: 58785 - 59645 (-)
Type: TC
Location: 58785 - 59645 (-)
Gene ID: k141_137374_40
Type: pfam
Location: 59719 - 59949 (-)
Type: pfam
Location: 59719 - 59949 (-)
Gene ID: k141_137374_41
Type:
Location: 59967 - 60791 (-)
Type:
Location: 59967 - 60791 (-)
Gene ID: k141_137374_42
Type: CAZyme
Location: 60879 - 63656 (-)
Type: CAZyme
Location: 60879 - 63656 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900549685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_137374_39 | vegetarian > omnivore | 1.15605 | 0.01386 |
| k141_137374_39 | vegetarian > vegan | 1.30882 | 0.01560 |