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Cluster: CGMR049670_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_137001 k141_137001_8 8808 10874 - GH36
CAZyme k141_137001 k141_137001_9 10922 12994 - GH36
STP k141_137001 k141_137001_10 13271 13843 - SIS
pfam k141_137001 k141_137001_11 14016 14984 - ROK
CAZyme k141_137001 k141_137001_12 14993 17401 - GH2
CAZyme k141_137001 k141_137001_13 17502 20138 - CBM67 | GH78
TF k141_137001 k141_137001_14 20203 21213 - LacI
NULL(UNKNOWN) k141_137001 k141_137001_15 21819 21992 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_137001 k141_137001_16 22014 22271 - 1.E.43.1.10
Gene ID: k141_137001_8
Type: CAZyme
Location: 8808 - 10874 (-)
Gene ID: k141_137001_9
Type: CAZyme
Location: 10922 - 12994 (-)
Gene ID: k141_137001_10
Type: STP
Location: 13271 - 13843 (-)
Gene ID: k141_137001_11
Type: pfam
Location: 14016 - 14984 (-)
Gene ID: k141_137001_12
Type: CAZyme
Location: 14993 - 17401 (-)
Gene ID: k141_137001_13
Type: CAZyme
Location: 17502 - 20138 (-)
Gene ID: k141_137001_14
Type: TF
Location: 20203 - 21213 (-)
Gene ID: k141_137001_15
Type:
Location: 21819 - 21992 (-)
Gene ID: k141_137001_16
Type: TC
Location: 22014 - 22271 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_137001_10 vegetarian > vegan 1.28405 0.01560

🧭 Explore Read Mapping of CGC

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