Genome Details
Selected Rep_genome_ID: CGMR045200
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter freundii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR045200 | 4,959,985 | 99.46% | 0.9% | China | Asia | CGMR |
| SW201_20 | 4,125,950 | 90.02% | 1.67% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR045200_CGC9 | CGCFAM_00002 | Yes | 4 | 3 | |
| CGMR045200_CGC5 | CGCFAM_00207 | Yes | 3 | 1 | |
| CGMR045200_CGC28 | CGCFAM_00214 | Yes | 3 | 1 | alpha-glucan |
| CGMR045200_CGC21 | CGCFAM_00218 | Yes | 5 | 1 | chitin |
| CGMR045200_CGC33 | CGCFAM_00294 | Yes | 3 | 2 | |
| CGMR045200_CGC49 | CGCFAM_00471 | Yes | 4 | 1 | |
| CGMR045200_CGC1 | CGCFAM_00698 | Yes | 11 | 9 | |
| CGMR045200_CGC29 | CGCFAM_01194 | Yes | 12 | 2 | |
| CGMR045200_CGC58 | CGCFAM_01760 | Yes | 4 | 1 | |
| CGMR045200_CGC19 | CGCFAM_01811 | Yes | 4 | 1 | host glycan |
| CGMR045200_CGC6 | CGCFAM_02600 | Yes | 13 | 1 | |
| CGMR045200_CGC23 | CGCFAM_02793 | Yes | 13 | 1 | |
| CGMR045200_CGC47 | CGCFAM_03299 | Yes | 9 | 1 | |
| CGMR045200_CGC25 | CGCFAM_03309 | Yes | 5 | 1 | |
| CGMR045200_CGC10 | CGCFAM_03363 | Yes | 11 | 2 | |
| CGMR045200_CGC57 | CGCFAM_03820 | Yes | 5 | 2 | |
| CGMR045200_CGC4 | CGCFAM_04724 | Yes | 4 | 2 | |
| PUL0291_CGMR045200_C6 | CGCFAM_06390 | Yes | 9 | 1 | host glycan |
| CGMR045200_CGC52 | CGCFAM_08608 | Yes | 15 | 1 |
Top CAZyme Families