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Cluster: CGMR045200_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6584 k141_6584_99 115121 116488 + 1.B.17.3.10
TC k141_6584 k141_6584_100 116526 117095 - 9.B.27.2.7
TC k141_6584 k141_6584_101 117338 117925 + 9.B.29.3.1
peptidase k141_6584 k141_6584_102 118106 119053 + S11.002
pfam k141_6584 k141_6584_103 119118 120827 - FAD_binding_4 | Lact-deh-memb
CAZyme k141_6584 k141_6584_104 121060 123357 + GH3
TC k141_6584 k141_6584_105 123553 124470 + 3.A.1.12.15
TC k141_6584 k141_6584_106 124486 125652 + 3.A.1.12.15
TC k141_6584 k141_6584_107 125645 126592 + 3.A.1.12.15
TC k141_6584 k141_6584_108 126576 127307 + 3.A.1.12.15
NULL(UNKNOWN) k141_6584 k141_6584_109 127288 127395 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_6584 k141_6584_110 127447 128178 - MerR
TC k141_6584 k141_6584_111 128404 130089 + 9.B.33.1.1
Gene ID: k141_6584_99
Type: TC
Location: 115121 - 116488 (+)
Gene ID: k141_6584_100
Type: TC
Location: 116526 - 117095 (-)
Gene ID: k141_6584_101
Type: TC
Location: 117338 - 117925 (+)
Gene ID: k141_6584_102
Type: peptidase
Location: 118106 - 119053 (+)
Gene ID: k141_6584_103
Type: pfam
Location: 119118 - 120827 (-)
Gene ID: k141_6584_104
Type: CAZyme
Location: 121060 - 123357 (+)
Gene ID: k141_6584_105
Type: TC
Location: 123553 - 124470 (+)
Gene ID: k141_6584_106
Type: TC
Location: 124486 - 125652 (+)
Gene ID: k141_6584_107
Type: TC
Location: 125645 - 126592 (+)
Gene ID: k141_6584_108
Type: TC
Location: 126576 - 127307 (+)
Gene ID: k141_6584_109
Type:
Location: 127288 - 127395 (-)
Gene ID: k141_6584_110
Type: TF
Location: 127447 - 128178 (-)
Gene ID: k141_6584_111
Type: TC
Location: 128404 - 130089 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6584_104 vegetarian > vegan 1.09167 0.00863

🧭 Explore Read Mapping of CGC

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