Cluster: CGMR045200_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045200
- CGC Family ID: CGCFAM_03309
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10682 | k141_10682_41 | 39845 | 42343 | + | GT2 |
| pfam | k141_10682 | k141_10682_42 | 42420 | 42647 | + | DUF1375 |
| pfam | k141_10682 | k141_10682_43 | 42648 | 43040 | - | MsyB |
| TC | k141_10682 | k141_10682_44 | 43718 | 45049 | + | 9.B.34.1.1 |
| TC | k141_10682 | k141_10682_45 | 45113 | 46333 | - | 2.A.1.2.20 |
Gene ID: k141_10682_41
Type: CAZyme
Location: 39845 - 42343 (+)
Type: CAZyme
Location: 39845 - 42343 (+)
Gene ID: k141_10682_42
Type: pfam
Location: 42420 - 42647 (+)
Type: pfam
Location: 42420 - 42647 (+)
Gene ID: k141_10682_43
Type: pfam
Location: 42648 - 43040 (-)
Type: pfam
Location: 42648 - 43040 (-)
Gene ID: k141_10682_44
Type: TC
Location: 43718 - 45049 (+)
Type: TC
Location: 43718 - 45049 (+)
Gene ID: k141_10682_45
Type: TC
Location: 45113 - 46333 (-)
Type: TC
Location: 45113 - 46333 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter freundii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.