Cluster: CGMR045200_CGC10
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045200
- CGC Family ID: CGCFAM_03363
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6584 | k141_6584_335 | 350464 | 351834 | - | 3.A.6.2.1 |
| TC | k141_6584 | k141_6584_336 | 351834 | 352541 | - | 3.A.6.2.1 |
| pfam | k141_6584 | k141_6584_337 | 352534 | 353532 | - | FliG_C | FliG_M | FliG_N |
| TC | k141_6584 | k141_6584_338 | 353525 | 355198 | - | 3.A.6.2.1 |
| pfam | k141_6584 | k141_6584_339 | 355415 | 355729 | + | FliE |
| pfam | k141_6584 | k141_6584_340 | 355944 | 357386 | - | Glucos_trans_II |
| CAZyme | k141_6584 | k141_6584_341 | 357376 | 358311 | - | GT2 |
| pfam | k141_6584 | k141_6584_342 | 358846 | 359079 | - | TusA |
| TC | k141_6584 | k141_6584_343 | 359076 | 360281 | - | 9.B.102.1.1 |
| pfam | k141_6584 | k141_6584_344 | 360467 | 360880 | + | YedD |
| CAZyme | k141_6584 | k141_6584_345 | 360921 | 362408 | - | GH13_5 |
Gene ID: k141_6584_335
Type: TC
Location: 350464 - 351834 (-)
Type: TC
Location: 350464 - 351834 (-)
Gene ID: k141_6584_336
Type: TC
Location: 351834 - 352541 (-)
Type: TC
Location: 351834 - 352541 (-)
Gene ID: k141_6584_337
Type: pfam
Location: 352534 - 353532 (-)
Type: pfam
Location: 352534 - 353532 (-)
Gene ID: k141_6584_338
Type: TC
Location: 353525 - 355198 (-)
Type: TC
Location: 353525 - 355198 (-)
Gene ID: k141_6584_339
Type: pfam
Location: 355415 - 355729 (+)
Type: pfam
Location: 355415 - 355729 (+)
Gene ID: k141_6584_340
Type: pfam
Location: 355944 - 357386 (-)
Type: pfam
Location: 355944 - 357386 (-)
Gene ID: k141_6584_341
Type: CAZyme
Location: 357376 - 358311 (-)
Type: CAZyme
Location: 357376 - 358311 (-)
Gene ID: k141_6584_342
Type: pfam
Location: 358846 - 359079 (-)
Type: pfam
Location: 358846 - 359079 (-)
Gene ID: k141_6584_343
Type: TC
Location: 359076 - 360281 (-)
Type: TC
Location: 359076 - 360281 (-)
Gene ID: k141_6584_344
Type: pfam
Location: 360467 - 360880 (+)
Type: pfam
Location: 360467 - 360880 (+)
Gene ID: k141_6584_345
Type: CAZyme
Location: 360921 - 362408 (-)
Type: CAZyme
Location: 360921 - 362408 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter freundii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.