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Cluster: CGMR045200_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1912 k141_1912_5 1906 3183 - GT30
CAZyme k141_1912 k141_1912_6 3608 4732 + GT4
pfam k141_1912 k141_1912_7 4725 5522 + Kdo
CAZyme k141_1912 k141_1912_8 5553 6572 + GT8
CAZyme k141_1912 k141_1912_9 6623 7630 + GT8
CAZyme k141_1912 k141_1912_10 7661 8605 - GT8
CAZyme k141_1912 k141_1912_11 8606 9661 - GT9
CAZyme k141_1912 k141_1912_12 9663 10676 - GT2
TC k141_1912 k141_1912_13 10669 11952 - 9.B.67.5.1
CAZyme k141_1912 k141_1912_14 11969 12937 - GT9
CAZyme k141_1912 k141_1912_15 12941 13987 - GT9
Gene ID: k141_1912_5
Type: CAZyme
Location: 1906 - 3183 (-)
Gene ID: k141_1912_6
Type: CAZyme
Location: 3608 - 4732 (+)
Gene ID: k141_1912_7
Type: pfam
Location: 4725 - 5522 (+)
Gene ID: k141_1912_8
Type: CAZyme
Location: 5553 - 6572 (+)
Gene ID: k141_1912_9
Type: CAZyme
Location: 6623 - 7630 (+)
Gene ID: k141_1912_10
Type: CAZyme
Location: 7661 - 8605 (-)
Gene ID: k141_1912_11
Type: CAZyme
Location: 8606 - 9661 (-)
Gene ID: k141_1912_12
Type: CAZyme
Location: 9663 - 10676 (-)
Gene ID: k141_1912_13
Type: TC
Location: 10669 - 11952 (-)
Gene ID: k141_1912_14
Type: CAZyme
Location: 11969 - 12937 (-)
Gene ID: k141_1912_15
Type: CAZyme
Location: 12941 - 13987 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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