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Cluster: CGMR045200_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12422 k141_12422_36 37365 38222 - 4.A.6.1.17
TC k141_12422 k141_12422_37 38222 38971 - 4.A.6.1.17
TC k141_12422 k141_12422_38 38997 39482 - 4.A.6.1.17
TC k141_12422 k141_12422_39 39495 39920 - 4.A.6.1.17
TC k141_12422 k141_12422_40 40041 42839 - 3.A.23.1.1
pfam k141_12422 k141_12422_41 42930 43346 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
NULL(UNKNOWN) k141_12422 k141_12422_42 43477 43770 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_12422 k141_12422_43 43865 45247 + GH1
TC k141_12422 k141_12422_44 45294 46487 - 2.A.1.2.26
Gene ID: k141_12422_36
Type: TC
Location: 37365 - 38222 (-)
Gene ID: k141_12422_37
Type: TC
Location: 38222 - 38971 (-)
Gene ID: k141_12422_38
Type: TC
Location: 38997 - 39482 (-)
Gene ID: k141_12422_39
Type: TC
Location: 39495 - 39920 (-)
Gene ID: k141_12422_40
Type: TC
Location: 40041 - 42839 (-)
Gene ID: k141_12422_41
Type: pfam
Location: 42930 - 43346 (-)
Gene ID: k141_12422_42
Type:
Location: 43477 - 43770 (+)
Gene ID: k141_12422_43
Type: CAZyme
Location: 43865 - 45247 (+)
Gene ID: k141_12422_44
Type: TC
Location: 45294 - 46487 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12422_37 vegetarian > vegan 2.24566 0.04385

🧭 Explore Read Mapping of CGC

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