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Genome Details

Selected Rep_genome_ID: CGMR009396
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides sp019417325
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR009396 5,029,543 98.88% 0.38% China Asia CGMR
HRGMv2_0483 5,138,049 99.61% 0.769% Japan Asia HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR009396_CGC10 CGCFAM_00001 Yes 8 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR009396_CGC2 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR009396_CGC40 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR009396_CGC55 CGCFAM_00001 Yes 12 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR009396_CGC71 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR009396_CGC72 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR009396_CGC88 CGCFAM_00018 Yes 9 3
CGMR009396_CGC31 CGCFAM_00030 Yes 3 1
CGMR009396_CGC52 CGCFAM_00030 Yes 6 2
CGMR009396_CGC5 CGCFAM_00030 Yes 3 1
CGMR009396_CGC59 CGCFAM_00030 Yes 7 2
CGMR009396_CGC44 CGCFAM_00111 Yes 8 2 alpha-glucan
CGMR009396_CGC78 CGCFAM_00111 Yes 5 1 alpha-glucan
CGMR009396_CGC50 CGCFAM_00150 Yes 5 1
CGMR009396_CGC33 CGCFAM_00152 Yes 7 3
CGMR009396_CGC37 CGCFAM_00158 Yes 19 6
CGMR009396_CGC48 CGCFAM_00197 Yes 5 1
CGMR009396_CGC38 CGCFAM_00265 Yes 5 1 beta-glucan
CGMR009396_CGC39 CGCFAM_00301 Yes 5 1
CGMR009396_CGC18 CGCFAM_00341 Yes 3 1
CGMR009396_CGC67 CGCFAM_00376 Yes 5 1 host glycan
CGMR009396_CGC13 CGCFAM_00461 Yes 13 4
CGMR009396_CGC81 CGCFAM_00485 Yes 15 6 galactan/pectin/host glycan
CGMR009396_CGC15 CGCFAM_00623 Yes 4 1
CGMR009396_CGC80 CGCFAM_00792 Yes 5 1
Top CAZyme Families